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COVID-19 in a Rural Community: Outbreak Dynamics, Contact Tracing and Environmental RNA

Artículo de divulgación publicado en Life Sciences

27 de mayo de 2020

Fernandez de Mera IG., Rodriguez del Rio FJ., de la Fuente J., Perez-Sancho M., Hervas D., Moreno I., Dominguez M., Dominguez L. y Gortazar C.


Background: Since March 2020, Spain is severely hit by the ongoing pandemic of coronavirus disease 19 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Understanding and disrupting the early transmission dynamics of the infection is crucial for impeding sustained transmission. Methods: We recorded all COVID-19 cases and traced their contacts in an isolated rural community. We also sampled 10 households, 6 public service sites and the wastewater from the village sewage for environmental SARS-CoV-2 RNA. Results: The first village patient diagnosed with COVID-19-compatible symptoms occurred on March 3, 2020, twelve days before lockdown. A peak of 39 cases occurred on March 30. By May 15, the accumulated number of symptomatic cases was 53 (6% of the population), of which only 22 (41%) had been tested and confirmed by RT-PCR as SARS-CoV-2 infected, including 16 hospitalized patients. Contacts (n=144) were six times more likely to develop symptoms. Environmental sampling detected SARS-CoV-2 RNA in two households with known active cases and in two public service sites: the petrol station and the pharmacy. Samples from other sites and the wastewater tested negative. Conclusions: The low proportion of patients tested by RT-PCR calls for urgent changes in disease management. We propose that early testing of all cases and their close contacts would reduce infection spread, reducing the disease burden and fatalities. In a context of restricted testing, environmental RNA surveillance might prove useful for early warning and to identify high-risk settings enabling a targeted resource deployment







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COVID-19 in a Rural Community: Outbreak Dynamics, Contact Tracing and Environmental RNA



Participantes:

Universidad de Castilla La ManchaSanidad y Biotecnología (SaBio). Instituto de Investigación en Recursos Cinegéticos (IREC). Consejo Superior de Investigaciones Científicas (CSIC). Universidad de Castilla La Mancha (UCLM). Gobierno de Castilla-La Mancha (JCCM).

Health Service of the Government of Castilla-La ManchaLocal Medical Service Horcajo de los Montes. Health Service of the Government of Castilla-La Mancha (SESCAM).

Oklahoma State UniversityDepartament of Veterinary Pathobiology. Center for Veterinary Health Sciences (CVHS). Oklahoma State University (OSU).

Universidad ComplutenseServicio de Micobacterias (MYC). Centro de Vigilancia Sanitaria Veterinaria (VISAVET). Universidad Complutense (UCM).

Universidad ComplutenseDepartamento de Sanidad Animal. Facultad de Veterinaria. Universidad Complutense (UCM).

Instituto de Salud Carlos IIIServicio de Inmunología. Centro Nacional de Microbiología (CNM). Instituto de Salud Carlos III (ISCIII).








TÍTULO: COVID-19 in a Rural Community: Outbreak Dynamics, Contact Tracing and Environmental RNA


TIPO: Artículo de divulgación


AUTORES: Fernandez de Mera IG., Rodriguez del Rio FJ., de la Fuente J., Perez-Sancho M., Hervas D., Moreno I., Dominguez M., Dominguez L. y Gortazar C.


3rd
José de Jesús de la Fuente García
4th
Marta Pérez Sancho
7th
Mercedes Domínguez Rodríguez
8th
Lucas Domínguez Rodríguez
Last
Christian Gortazar Schmidt

REVISTA: Life Sciences


IDIOMA: Español


ISSN: 0024-3205


FECHA: 27 de mayo de 2020


EDITORIAL: Elsevier, 1997


DOI: https://doi.org/10.20944/preprints202005.0450.v1


CITA ESTA PUBLICACIÓN:

Fernandez de Mera IG., Rodriguez del Rio FJ., de la Fuente J., Perez-Sancho M., Hervas D., Moreno I., Dominguez M., Dominguez L. y Gortazar C. COVID-19 in a Rural Community: Outbreak Dynamics, Contact Tracing and Environmental RNA. Life Sciences. Elsevier, 1997. ISBN: 0024-3205. 2020. (Artículo de divulgación)


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